BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB021A01SP1|AL427692
(745 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1570 839 0.0
>3x_Contig1570
Length = 12233
Score = 839 bits (414), Expect = 0.0
Identities = 653/744 (87%), Gaps = 1/744 (0%)
Strand = Plus / Minus
Query: 1 gctctgctcattatagcctmcgatttaccattccctgttcgcgtttaaggtcagcggttt 60
|||||||||||||||| | |||||||||||| |||||||| ||||||||||||| ||||
Sbjct: 3724 gctctgctcattatagaatacgatttaccattacctgttcgagtttaaggtcagcagttt 3665
Query: 61 acsassctatgatgggtttcacttttgscatggttcgtgctattgtkgccccatctatkc 120
|| | |||| || |||||| |||| |||||||||||||||| | ||||||||||| |
Sbjct: 3664 acaaaactataataagtttcaattttaacatggttcgtgctattattgccccatctattc 3605
Query: 121 tggccagtgatttcgctaagtkgggttgtgagtgtcacaatgtgattgrctctggkgccg 180
| |||||||||||| |||| | |||||||| ||||||||||||||| |||||| ||||
Sbjct: 3604 tagccagtgatttcactaaattaggttgtgaatgtcacaatgtgattaactctggtgccg 3545
Query: 181 atkggttacgcatcggtatkgtgggkggkcacttcgttcctratrtgtcattgggacagc 240
|| |||||| ||||| ||| ||| || |||||||||||| || ||||||||||||| |
Sbjct: 3544 attggttacacatcgatattatggatggtcacttcgttcctaatatgtcattgggacaac 3485
Query: 241 cggttgtcgagtcgctacgtggggttatcggggrgtgcaacggtccagacgccaagttac 300
|||||||||| ||||||||| |||||||| || ||||| ||||||| |||||||||
Sbjct: 3484 cggttgtcgaatcgctacgtaaagttatcggaaagtacaacgatccagacaccaagttac 3425
Query: 301 caagggcgttcttcggttgtsatatgatggttagtgagcctgggaggkgggtcggggatt 360
|||| || ||||||| |||| |||||||||||||||| |||| || |||||| ||||
Sbjct: 3424 caagagcattcttcgattgtcatatgatggttagtgaacctgaaagatgggtcgaagatt 3365
Query: 361 ttgckagggtcggttgcgatcggttcacattccattgcggggctacagggggcccggtag 420
|||| ||| |||||||||||| |||||||||||||| || ||||||| || ||||||||
Sbjct: 3364 ttgctaggatcggttgcgatcagttcacattccattacgaggctacaaaggacccggtag 3305
Query: 421 cgttggttgggctaattggggggcgtggtatgggggckgcctgtkctgtgaagccaggkg 480
|||||||| ||||||| | || ||||||| ||| |||||| |||||||||||||
Sbjct: 3304 cgttggttaagctaattaagaagcatggtatgaaggctgcctgttctgtgaagccaggta 3245
Query: 481 cccctgtggatgtgttgtgcgagttggcgccatccctgggtatggctcttgtgatggctg 540
|||||||||||||||||| ||||||||| |||||||||| |||||||||||| ||| |||
Sbjct: 3244 cccctgtggatgtgttgtacgagttggcaccatccctggatatggctcttgtaatgactg 3185
Query: 541 tcgagccgggtttcggtggccaagggttcgtggccg-atatgatgagcaaagtgaaggac 599
|||| |||||||||||||||||| ||| |||||| |||||||||||||||||||||||
Sbjct: 3184 tcgaaccgggtttcggtggccaaaaattcatggccggatatgatgagcaaagtgaaggac 3125
Query: 600 ttgagaactagatttcctaatttgaacattcaagtcgatggtggtcttggtaaacagaat 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3124 ttgagaactagatttcctaatttgaacattcaagtcgatggtggtcttggtaaacagaat 3065
Query: 660 gtcgaacttgctgccgaggcaggtgccaatgtcattgttgccggtacctctgtgttccgc 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3064 gtcgaacttgctgccgaggcaggtgccaatgtcattgttgccggtacctctgtgttccgc 3005
Query: 720 gcgcacgacccagcagatgtcatt 743
||||||||||||||||||||||||
Sbjct: 3004 gcgcacgacccagcagatgtcatt 2981
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.715 1.33
Gapped
Lambda K H
1.40 0.715 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1856
Number of Sequences: 1807
Number of extensions: 1856
Number of successful extensions: 38
Number of sequences better than 1.0e-20: 1
length of query: 745
length of database: 10,358,551
effective HSP length: 16
effective length of query: 729
effective length of database: 10,329,639
effective search space: 7530306831
effective search space used: 7530306831
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.4 bits)
S1: 12 (24.8 bits)
S2: 49 (99.7 bits)